2017-8-11 16:0:3Tue Dec 13 2016 11:16:30 GMT+0100 (CET)
proteinLength
137
geneLength
411
Gene
Coordinates
219,087 → 219,602
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
MGNA-C517 (ybdD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2515 NBRP B. subtilis, Japan]
aminos
MNSNGDKLSLSVQNLANTNEITIVQAIGELKKSGKDAIPVLVEALKEEGSLCNIAAAVLGEFGEDASEAAEELSCLLKSHAEDTRMAAAISLMRIGKPSLPFVIKIAQESEGQSCFWASWCIAWIDPSCIEPKMYKCLKYEHEHPSGIVAPFAAEEALGKLIAFQLKDKED
[SW|Categories] containing this gene/protein
[SW|proteins of unknown function], [SW|prophage 1]
Gene
Coordinates on the chromosome (coding sequence)
219,087 -> 219,602
Expression and Regulation
Operon
''[[protein|skfA]]-[[protein|skfB]]-[[protein|skfC]]-[[protein|skfE]]-[[protein|skfF]]-[[protein|skfG]]-[[protein|skfH]]'' [Pubmed|16816204]
Expression and Regulation
[SW|Sigma factor]
[[protein|SigA]] [Pubmed|16452424]
Expression and Regulation
Regulation
expressed under conditions that trigger sporulation ([SW|Spo0A]) [http://www.ncbi.nlm.nih.gov/sites/entrez/14651647,15687200 PubMed]
repressed during logrithmic growth ([[protein|AbrB]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/15687200,17720793 PubMed]
induced by phosphate starvation ([[protein|PhoP]]) [Pubmed|16816204]
Expression and Regulation
Regulatory mechanism
[SW|Spo0A]: transcription activation [http://www.ncbi.nlm.nih.gov/sites/entrez/14651647,15687200 PubMed]
[[protein|AbrB]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/15687200,17720793 PubMed]
[[protein|PhoP]]: transcription activation [Pubmed|16816204]
Expression and Regulation
Additional information
Northern blotting during during phosphate limitation showed an intense 0.25 kb '[[protein|skfA]]'-specific transcript, and a weaker 6.5 kb '[[protein|skfA]]-[[protein|skfB]]-[[protein|skfC]]-[[protein|skfE]]-[[protein|skfF]]-[[protein|skfG]]-[[protein|skfH]]' transcript. [http://www.ncbi.nlm.nih.gov/pubmed/16816204 PubMed]